PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN38923.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 471aa    MW: 51409.3 Da    PI: 6.5219
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN38923.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.6e-12289334454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h e+Er+RR+++N++f  Lr ++P+       K++Ka+ L  A+ YI +L
  KHN38923.1 289 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYITEL 334
                 799***********************6.....5***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142158.6E-10239IPR025610Transcription factor MYC/MYB N-terminal
PROSITE profilePS5088817.193285334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.02E-14288339No hitNo description
SuperFamilySSF474594.45E-19288354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-10289334IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-18289354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-16291340IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MFGLQTLVCI PSANGVVELG STELIFQNSD LMNKVKVLFN FSNNNFDMGS SWPATSADQG  60
ENDPSSLWLS DPEVRDSVNT AAATPSVMVP AQTQGISISK TMQLESSIQT PGSSTLTETP  120
SSIHAIPQNQ SVFSRELNFS EYGFDPKSGN NQNHHSLKPE SGEILSFGES RRTSYGGVNG  180
NTNTNTNSNS HFFSGQSPFV AAVDENKKNN MSNNGKKRSP NSRGSNDDGM LSFTSGVIIP  240
ATNLKSGGGG DSDHSDLEAS VVKDPVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK  300
LNQRFYALRA VVPNVSKMDK ASLLGDAISY ITELKSKLQT LESDKDVLHK QLEGVKKELE  360
KTTDNVSSNH ACNNNNNNKL SSNQPALIDL VEMDVKIIGW DAMITITCSK KNHPAATLMT  420
ALMELDLDVH YATVTLVNDL MIQQATVKMG SRFYTQEQLR AALSAKVGDV R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270278KRPRKRGRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003534274.20.0PREDICTED: transcription factor MYC2-like
SwissprotQ392041e-127MYC2_ARATH; Transcription factor MYC2
TrEMBLA0A0B2S2N10.0A0A0B2S2N1_GLYSO; Transcription factor MYC2
STRINGGLYMA09G33730.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF29383364
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.11e-104bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]